Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
---|---|---|---|---|---|---|---|---|---|
KIRP | rs113536473 | chr18:3288708 | T/TCTCA | 4.64E-8 | 211 | 14.85 | 20.2 | 10.83 | KM Plot |
KIRP | rs113547309 | chr15:24813794 | A/G | 7.05E-7 | 213 | 15.88 | 17.87 | 9.77 | KM Plot |
KIRP | rs113558975 | chr14:59998385 | G/A | 0.000251 | 212 | 16.43 | 16.53 | 11.2 | KM Plot |
KIRP | rs113562114 | chr14:59875052 | A/G | 0.000111 | 213 | 16.43 | 16.53 | 6.63 | KM Plot |
KIRP | rs113568656 | chr14:60011922 | C/T | 0.000185 | 214 | 15.33 | 18.7 | 11.2 | KM Plot |
KIRP | rs113580390 | chr10:63356515 | A/T | 0 | 212 | 18.25 | 9 | 1.17 | KM Plot |
KIRP | rs113599159 | chr15:24504239 | A/G | 0.000139 | 213 | 17 | 14.8 | 9.48 | KM Plot |
KIRP | rs11361992 | chr1:89845926 | GT/G | 7.36E-10 | 207 | 3.73 | 15.07 | 16.77 | KM Plot |
KIRP | rs113638539 | chr4:88211858 | T/A | 0.000555 | 211 | 17.02 | 12.13 | 12.47 | KM Plot |
KIRP | rs113638657 | chr4:88204706 | G/A | 0.000556 | 211 | 17 | 12.93 | 12.47 | KM Plot |
KIRP | rs113645439 | chr10:70689983 | C/T | 7.43E-9 | 214 | 14.87 | 18.77 | 9.77 | KM Plot |
KIRP | rs113657299 | chr18:3286866 | AT/A | 5.95E-8 | 208 | 14.85 | 18.03 | 10.83 | KM Plot |
KIRP | rs113707960 | chr19:6692030 | C/G | 0.000276 | 213 | 16.47 | 13.67 | 6.53 | KM Plot |
KIRP | rs113798548 | chr1:89557520 | G/T | 0.000139 | 206 | 15.65 | 19.68 | 10 | KM Plot |
KIRP | rs11383888 | chr3:100038274 | C/CT | 2.53E-5 | 208 | 16.43 | 18.47 | 4.53 | KM Plot |